Publications

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1996
Kinder M, Wiechert W. Stochastic simulation of biotechnical processes. Mathematics and Computers in Simulation 42 (2-3):17 [Internet]. 1996;42(2-3): 171–178. Available from: http://dx.doi.org/10.1016/0378-4754(95)00130-1
1999
Ziebuhr W, Krimmer V, Rachid S, Lössner I, Götz F, Hacker J. A novel mechanism of phase variation of virulence in Staphylococcus epidermidis: evidence for control of the polysaccharide intercellular adhesin synthesis by alternating insertion and excision of the insertion sequence element IS256. Mol Microbiol. 1999;32(2):345-56.
2003
Mascher T, Margulis NG, Wang T, Ye RW, Helmann JD. Cell wall stress responses in Bacillus subtilis: the regulatory network of the bacitracin stimulon. Mol Microbiol. 2003;50(5):1591-604.
2004
Mascher T, Zimmer SL, Smith T-A, Helmann JD. Antibiotic-inducible promoter regulated by the cell envelope stress-sensing two-component system LiaRS of Bacillus subtilis. Antimicrob Agents Chemother. 2004;48(8):2888-96.
Maier B, Chen I, Dubnau D, Sheetz MP. DNA transport into Bacillus subtilis requires proton motive force to generate large molecular forces. Nat Struct Mol Biol. 2004;11(7):643-9.
2005
Frommberger M, Hertkorn N, Englmann M, Jakoby S, Hartmann A, Kettrup A, Schmitt-Kopplin P. Analysis of N-acylhomoserine lactones after alkaline hydrolysis and anion-exchange solid-phase extraction by capillary zone electrophoresis-mass spectrometry. Electrophoresis. 2005;26(7-8):1523-32.
Hahn J, Maier B, Haijema BJ, Sheetz M, Dubnau D. Transformation proteins and DNA uptake localize to the cell poles in Bacillus subtilis. Cell. 2005;122(1):59-71.
2006
Pfaffelhuber P, Haubold B, Wakolbinger A. Approximate genealogies under genetic hitchhiking. Genetics. 2006;174(4):1995-2008.
Nöh K, Wahl A, Wiechert W. Computational tools for isotopically instationary 13C labeling experiments under metabolic steady state conditions. Metab Eng. 2006;8(6):554-77.
Li X, Fekete A, Englmann M, Götz C, Rothballer M, Frommberger M, Buddrus K, Fekete J, Cai C, Schröder P. Development and application of a method for the analysis of N-acylhomoserine lactones by solid-phase extraction and ultra high pressure liquid chromatography. J Chromatogr A. 2006;1134(1-2):186-93.
Batzilla CF, Rachid S, Engelmann S, Hecker M, Hacker J, Ziebuhr W. Impact of the accessory gene regulatory system (Agr) on extracellular proteins, codY expression and amino acid metabolism in Staphylococcus epidermidis. Proteomics. 2006;6(12):3602-13.
Bettenbrock K, Fischer S, Kremling A, Jahreis K, Sauter T, Gilles E-D. A quantitative approach to catabolite repression in Escherichia coli. J Biol Chem. 2006;281(5):2578-84.
Jordan S, Junker A, Helmann JD, Mascher T. Regulation of LiaRS-dependent gene expression in bacillus subtilis: identification of inhibitor proteins, regulator binding sites, and target genes of a conserved cell envelope stress-sensing two-component system. J Bacteriol. 2006;188(14):5153-66.
2007
Leisner M, Stingl K, Rädler JO, Maier B. Basal expression rate of comK sets a 'switching-window' into the K-state of Bacillus subtilis. Mol Microbiol. 2007;63(6):1806-16.
Bettenbrock K, Sauter T, Jahreis K, Kremling A, Lengeler JW, Gilles E-D. Correlation between growth rates, EIIACrr phosphorylation, and intracellular cyclic AMP levels in Escherichia coli K-12. J Bacteriol. 2007;189(19):6891-900.
Hense BA, Kuttler C, Müller J, Rothballer M, Hartmann A, Kreft J-U. Does efficiency sensing unify diffusion and quorum sensing?. Nat Rev Microbiol. 2007;5(3):230-9.
Englmann M, Fekete A, Gebefügi I, Schmitt-Kopplin P. The dosage of small volumes for chromatographic quantifications using a drop-on-demand dispenser system. Anal Bioanal Chem. 2007;388(5-6):1109-16.
Bartels FW, McIntosh M, Fuhrmann A, Metzendorf C, Plattner P, Sewald N, Anselmetti D, Ros R, Becker A. Effector-stimulated single molecule protein-DNA interactions of a quorum-sensing system in Sinorhizobium meliloti. Biophys J. 2007;92(12):4391-400.
Pagès D, Sanchez L, Conrod S, Gidrol X, Fekete A, Schmitt-Kopplin P, Heulin T, Achouak W. Exploration of intraclonal adaptation mechanisms of Pseudomonas brassicacearum facing cadmium toxicity. Environ Microbiol. 2007;9(11):2820-35.
Englmann M, Fekete A, Kuttler C, Frommberger M, Li X, Gebefügi I, Fekete J, Schmitt-Kopplin P. The hydrolysis of unsubstituted N-acylhomoserine lactones to their homoserine metabolites. Analytical approaches using ultra performance liquid chromatography. J Chromatogr A. 2007;1160(1-2):184-93.
Fekete A, Frommberger M, Rothballer M, Li X, Englmann M, Fekete J, Hartmann A, Eberl L, Schmitt-Kopplin P. Identification of bacterial N-acylhomoserine lactones (AHLs) with a combination of ultra-performance liquid chromatography (UPLC), ultra-high-resolution mass spectrometry, and in-situ biosensors. Anal Bioanal Chem. 2007;387(2):455-67.
Tiaden A, Spirig T, Weber SS, Brüggemann H, Bosshard R, Buchrieser C, Hilbi H. The Legionella pneumophila response regulator LqsR promotes host cell interactions as an element of the virulence regulatory network controlled by RpoS and LetA. Cell Microbiol. 2007;9(12):2903-20.
Jordan S, Rietkötter E, Strauch MA, Kalamorz F, Butcher BG, Helmann JD, Mascher T. LiaRS-dependent gene expression is embedded in transition state regulation in Bacillus subtilis. Microbiology. 2007;153(Pt 8):2530-40.
Biedendieck R, Yang Y, Deckwer W-D, Malten M, Jahn D. Plasmid system for the intracellular production and purification of affinity-tagged proteins in Bacillus megaterium. Biotechnol Bioeng. 2007;96(3):525-37.
Stecher B, Robbiani R, Walker AW, Westendorf AM, Barthel M, Kremer M, Chaffron S, Macpherson AJ, Buer J, Parkhill J. Salmonella enterica serovar typhimurium exploits inflammation to compete with the intestinal microbiota. PLoS Biol. 2007;5(10):2177-89.

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